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 brain metastasis


Robust High-Resolution Multi-Organ Diffusion MRI Using Synthetic-Data-Tuned Prompt Learning

Qian, Chen, Zhang, Haoyu, Ma, Junnan, Zhu, Liuhong, Cai, Qingrui, Wang, Yu, Song, Ruibo, Li, Lv, Mei, Lin, Jiang, Xianwang, Xu, Qin, Jiang, Boyu, Tao, Ran, Chen, Chunmiao, Chen, Shufang, Liang, Dongyun, Guo, Qiu, Lin, Jianzhong, Kang, Taishan, Lu, Mengtian, Fu, Liyuan, Huang, Ruibin, Wan, Huijuan, Huang, Xu, Wang, Jianhua, Guo, Di, Zhong, Hai, Zhou, Jianjun, Qu, Xiaobo

arXiv.org Artificial Intelligence

A b stract: Clinical adoption of multi - shot diffusion - weighted magnetic resonance imaging ( multi - shot DWI) for body - wide tumor diagnostics is limited by severe motion - induced phase artifacts from respiration, peristalsis, and so on, compounded by multi - organ, multi - sl ice, multi - direction and multi - b - value complexities. Here, we introduce a reconstruction framework, LoSP - Prompt, that overcomes these challenges through physics - informed modeling and synthetic - data - driven prompt learning. We model int er - shot phase variations as a high - order Locally Smooth Phase (LoSP), integrated into a low - rank Hankel matrix reconstruction. Crucially, the algorithm's rank parameter is automat ically set via prompt learning trained exclusively on synthetic abdominal DWI data emulatin g physiological motion. The approach eliminates navigator signals and real istic data supervision, providing an interpretable, robust solution for high - resolution multi - organ multi - shot DWI. Ho wever, the ms - iEPI DWI is very sensitive to the inter - shot motion during the data acquisition of each shot ( Figure 1(a - d)) . E ven s light movement on the millimeter scale will cause the significant extra inter - shot phase (motion - induced phase in Fig . All t hese methods can successfully remove image artifacts in brain imaging ( F ig. 1 ( h)), g reatly promot ing applications of multi - shot high - resolution DWI . For the a bdominal tumor diagnosis, such as liver and kidney, ms - iEPI DWI has not been applied well ( F ig. 1 ( l)) . The se movement s bring organ - specific and high - order motion - induced phase s ( Figure 1 ( i, j)), which do not conform to the smooth phase prior assumption made in multi - shot DWI brain imaging .


Performance of GPT-5 in Brain Tumor MRI Reasoning

Safari, Mojtaba, Wang, Shansong, Hu, Mingzhe, Eidex, Zach, Li, Qiang, Yang, Xiaofeng

arXiv.org Artificial Intelligence

Accurate differentiation of brain tumor types on magnetic resonance imaging (MRI) is critical for guiding treatment planning in neuro-oncology. Recent advances in large language models (LLMs) have enabled visual question answering (VQA) approaches that integrate image interpretation with natural language reasoning. In this study, we evaluated GPT-4o, GPT-5-nano, GPT-5-mini, and GPT-5 on a curated brain tumor VQA benchmark derived from 3 Brain Tumor Segmentation (BraTS) datasets - glioblastoma (GLI), meningioma (MEN), and brain metastases (MET). Each case included multi-sequence MRI triplanar mosaics and structured clinical features transformed into standardized VQA items. Models were assessed in a zero-shot chain-of-thought setting for accuracy on both visual and reasoning tasks. Results showed that GPT-5-mini achieved the highest macro-average accuracy (44.19%), followed by GPT-5 (43.71%), GPT-4o (41.49%), and GPT-5-nano (35.85%). Performance varied by tumor subtype, with no single model dominating across all cohorts. These findings suggest that GPT-5 family models can achieve moderate accuracy in structured neuro-oncological VQA tasks, but not at a level acceptable for clinical use.


Exploring Strategies for Personalized Radiation Therapy Part I Unlocking Response-Related Tumor Subregions with Class Activation Mapping

Peng, Hao, Jiang, Steve, Timmerman, Robert

arXiv.org Artificial Intelligence

Personalized precision radiation therapy requires more than simple classification, it demands the identification of prognostic, spatially informative features and the ability to adapt treatment based on individual response. This study compares three approaches for predicting treatment response: standard radiomics, gradient based features, and convolutional neural networks enhanced with Class Activation Mapping. We analyzed 69 brain metastases from 39 patients treated with Gamma Knife radiosurgery. An integrated autoencoder classifier model was used to predict whether tumor volume would shrink by more than 20 percent at a three months follow up, framed as a binary classification task. The results highlight their strength in hierarchical feature extraction and the classifiers discriminative capacity. Among the models, pixel wise CAM provides the most detailed spatial insight, identifying lesion specific regions rather than relying on fixed patterns, demonstrating strong generalization. In non responding lesions, the activated regions may indicate areas of radio resistance. Pixel wise CAM outperformed both radiomics and gradient based methods in classification accuracy. Moreover, its fine grained spatial features allow for alignment with cellular level data, supporting biological validation and deeper understanding of heterogeneous treatment responses. Although further validation is necessary, these findings underscore the promise in guiding personalized and adaptive radiotherapy strategies for both photon and particle therapies.


Exploring Strategies for Personalized Radiation Therapy Part II Predicting Tumor Drift Patterns with Diffusion Models

Peng, Hao, Jiang, Steve, Timmerman, Robert

arXiv.org Artificial Intelligence

Radiation therapy outcomes are decided by two key parameters, dose and timing, whose best values vary substantially across patients. This variability is especially critical in the treatment of brain cancer, where fractionated or staged stereotactic radiosurgery improves safety compared to single fraction approaches, but complicates the ability to predict treatment response. To address this challenge, we employ Personalized Ultra-fractionated Stereotactic Adaptive Radiotherapy (PULSAR), a strategy that dynamically adjusts treatment based on how each tumor evolves over time. However, the success of PULSAR and other adaptive approaches depends on predictive tools that can guide early treatment decisions and avoid both overtreatment and undertreatment. However, current radiomics and dosiomics models offer limited insight into the evolving spatial and temporal patterns of tumor response. To overcome these limitations, we propose a novel framework using Denoising Diffusion Implicit Models (DDIM), which learns data-driven mappings from pre to post treatment imaging. In this study, we developed single step and iterative denoising strategies and compared their performance. The results show that diffusion models can effectively simulate patient specific tumor evolution and localize regions associated with treatment response. The proposed strategy provides a promising foundation for modeling heterogeneous treatment response and enabling early, adaptive interventions, paving the way toward more personalized and biologically informed radiotherapy.


BrainMetDetect: Predicting Primary Tumor from Brain Metastasis MRI Data Using Radiomic Features and Machine Learning Algorithms

Sadeghsalehi, Hamidreza

arXiv.org Artificial Intelligence

Objective: Brain metastases (BMs) are common in cancer patients and determining the primary tumor site is crucial for effective treatment. This study aims to predict the primary tumor site from BM MRI data using radiomic features and advanced machine learning algorithms. Methods: We utilized a comprehensive dataset from Ocana-Tienda et al. (2023) comprising MRI and clinical data from 75 patients with BMs. Radiomic features were extracted from post-contrast T1-weighted MRI sequences. Feature selection was performed using the GINI index, and data normalization was applied to ensure consistent scaling. We developed and evaluated Random Forest and XGBoost classifiers, both with and without hyperparameter optimization using the FOX (Fox optimizer) algorithm. Model interpretability was enhanced using SHAP (SHapley Additive exPlanations) values. Results: The baseline Random Forest model achieved an accuracy of 0.85, which improved to 0.93 with FOX optimization. The XGBoost model showed an initial accuracy of 0.96, increasing to 0.99 after optimization. SHAP analysis revealed the most influential radiomic features contributing to the models' predictions. The FOX-optimized XGBoost model exhibited the best performance with a precision, recall, and F1-score of 0.99. Conclusion: This study demonstrates the effectiveness of using radiomic features and machine learning to predict primary tumor sites from BM MRI data. The FOX optimization algorithm significantly enhanced model performance, and SHAP provided valuable insights into feature importance. These findings highlight the potential of integrating radiomics and machine learning into clinical practice for improved diagnostic accuracy and personalized treatment planning.


Analysis of clinical, dosimetric and radiomic features for predicting local failure after stereotactic radiotherapy of brain metastases in malignant melanoma

Hartong, Nanna E., Sachpazidis, Ilias, Blanck, Oliver, Etzel, Lucas, Peeken, Jan C., Combs, Stephanie E., Urbach, Horst, Zaitsev, Maxim, Baltas, Dimos, Popp, Ilinca, Grosu, Anca-Ligia, Fechter, Tobias

arXiv.org Artificial Intelligence

Background: The aim of this study was to investigate the role of clinical, dosimetric and pretherapeutic magnetic resonance imaging (MRI) features for lesion-specific outcome prediction of stereotactic radiotherapy (SRT) in patients with brain metastases from malignant melanoma (MBM). Methods: In this multicenter, retrospective analysis, we reviewed 517 MBM from 130 patients treated with SRT (single fraction or hypofractionated). For each gross tumor volume (GTV) 1576 radiomic features (RF) were calculated (788 each for the GTV and for a 3 mm margin around the GTV). Clinical parameters, radiation dose and RF from pretherapeutic contrast-enhanced T1-weighted MRI from different institutions were evaluated with a feature processing and elimination pipeline in a nested cross-validation scheme. Results: Seventy-two (72) of 517 lesions (13.9%) showed a local failure (LF) after SRT. The processing pipeline showed clinical, dosimetric and radiomic features providing information for LF prediction. The most prominent ones were the correlation of the gray level co-occurrence matrix of the margin (hazard ratio (HR): 0.37, confidence interval (CI): 0.23-0.58) and systemic therapy before SRT (HR: 0.55, CI: 0.42-0.70). The majority of RF associated with LF was calculated in the margin around the GTV. Conclusions: Pretherapeutic MRI based RF connected with lesion-specific outcome after SRT could be identified, despite multicentric data and minor differences in imaging protocols. Image data analysis of the surrounding metastatic environment may provide therapy-relevant information with the potential to further individualize radiotherapy strategies.


A personalized Uncertainty Quantification framework for patient survival models: estimating individual uncertainty of patients with metastatic brain tumors in the absence of ground truth

Wang, Yuqi, Gupta, Aarzu, Carpenter, David, Mullikin, Trey, Reitman, Zachary J., Floyd, Scott, Kirkpatrick, John, Salama, Joseph K., Sperduto, Paul W., Liu, Jian-Guo, Bashir, Mustafa R., Lafata, Kyle J.

arXiv.org Artificial Intelligence

TodevelopanovelUncertaintyQuantification (UQ) framework to estimate the uncertainty of patient survival models in the absence of ground truth, we developed and evaluated our approach based on a dataset of 1383 patients treated with stereotactic radiosurgery (SRS) for brain metastases between January 2015 and December 2020. Our motivating hypothesis is that a time-to-event prediction of a test patient on inference is more certain given a higher feature-space-similarity to patients in the training set. Therefore, the uncertainty for a particular patient-of-interest is represented by the concordance index between a patient similarity rank and a prediction similarity rank. Model uncertainty was defined as the increased percentage of the max uncertainty-constrained-AUC compared to the model AUC. We evaluated our method on multiple clinically-relevant endpoints, including time to intracranial progression (ICP), progression-free survival (PFS) after SRS, overall survival (OS), and time to ICP and/or death (ICPD), on a variety of both statistical and non-statistical models, including CoxPH, conditional survival forest (CSF), and neural multi-task linear regression (NMTLR). Our results show that all models had the lowest uncertainty on ICP (2.21%) and the highest uncertainty (17.28%) on ICPD. OS models demonstrated high variation in uncertainty performance, where NMTLR had the lowest uncertainty(1.96%)and CSF had the highest uncertainty (14.29%). In conclusion, our method can estimate the uncertainty of individual patient survival modeling results. As expected, our data empirically demonstrate that as model uncertainty measured via our technique increases, the similarity between a feature-space and its predicted outcome decreases.


Deep Learning and Radiomics: A Game-changer for Identifying Glioblastoma and Brain Metastases

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According to a recent study from Karl Landsteiner University of Health Sciences (KL Krems), using radiomics and deep learning algorithms can quickly and accurately distinguish between glioblastoma (primary tumors) and brain metastases. The study, which was published in Metabolites, discovered that magnetic resonance-based radiological data of tumor oxygen metabolism provide a solid foundation for discrimination via neural networks. This combination of oxygen metabolic radiomics and AI analysis was discovered to be vastly superior to human expert evaluations in all critical criteria, even when essential oxygen values did not differ significantly between tumor types. The neural networks' ability to make clear distinctions based on these values demonstrates the method's potential. Glioblastoma (GB) and brain metastasis (BM) are the most commonly occurring types of brain tumors in adults.


Deep-learning system identifies difficult-to-detect brain metastases

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Researchers at Duke University Medical Center have developed a deep-learning-based computer-aided detection (CAD) system to identify difficult-to-detect brain metastases on MR images. The algorithm exhibited excellent sensitivity and specificity, outperforming other CAD systems in development. The tool shows potential to enable earlier identification of emerging brain metastases, allowing them to be targeted with stereotactic radiosurgery (SRS) when they first appear and, for some patients, reducing the number of required treatments. SRS, which uses precisely focused photon beams to deliver a high dose of radiation to targets in the brain in a single radiotherapy session, is evolving into the standard-of-care treatment for patients with a limited number of brain metastases. To target a metastasis, however, it must first be identified on an MR image.


Deep-learning system identifies difficult-to-detect brain metastases – Physics World

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Researchers at Duke University Medical Center have developed a deep-learning-based computer-aided detection (CAD) system to identify difficult-to-detect brain metastases on MR images. The algorithm exhibited excellent sensitivity and specificity, outperforming other CAD systems in development. The tool shows potential to enable earlier identification of emerging brain metastases, allowing them to be targeted with stereotactic radiosurgery (SRS) when they first appear and, for some patients, reducing the number of required treatments. SRS, which uses precisely focused photon beams to deliver a high dose of radiation to targets in the brain in a single radiotherapy session, is evolving into the standard-of-care treatment for patients with a limited number of brain metastases. To target a metastasis, however, it must first be identified on an MR image.